checkAlignType: Ensure that AlignType Values are Valid
In HLAtools: Toolkit for HLA Immunogenomics
View source: R/accessoryFunctions.R
checkAlignType R Documentation
Ensure that AlignType Values are Valid
Description
Evaluates 'alignType' values to ensure that only "prot", "nuc", "codon" and "gen" are passed to downstream functions. If any other values are entered, a message describing excluded values is generated. If no valid 'alignType' values are are present, an error is generated, and any calling function is ended.
Usage
checkAlignType(alignType)
Arguments
alignType
A vector of character values specifying sequence alignment types to be used for a function.
Value
A character vector that includes only allowed 'alignType' values.
Examples
checkAlignType(c("nuc","prot","gDNA"))
HLAtools documentation built on June 8, 2025, 12:24 p.m.
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View source: R/accessoryFunctions.R
| checkAlignType | R Documentation |
Ensure that AlignType Values are Valid
Description
Evaluates 'alignType' values to ensure that only "prot", "nuc", "codon" and "gen" are passed to downstream functions. If any other values are entered, a message describing excluded values is generated. If no valid 'alignType' values are are present, an error is generated, and any calling function is ended.
Usage
checkAlignType(alignType)
Arguments
alignType |
A vector of character values specifying sequence alignment types to be used for a function. |
Value
A character vector that includes only allowed 'alignType' values.
Examples
checkAlignType(c("nuc","prot","gDNA"))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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