catNum3: catNum3

In HTGM3D: Three Dimensional High Throughput 'GoMiner'

catNum3

Description

assign the axis coordinate number to be used for the plotting position for each category

Usage

catNum3(l)

Arguments

l	list each component corresponds to an ontology branch, and contains the decreasing sorted tabulation of output of the number of times that a category appears in a triplet

Details

a component of l is like: GO_0005515__protein_binding GO_0042802__identical_protein_binding GO_0005178__integrin_binding 38 4 3

#' a component of l1 is like: GO_0005515__protein_binding GO_0042802__identical_protein_binding GO_0005178__integrin_binding 1 2 3

Value

returns a list each component corresponds to an ontology branch, and contains a vector of category plotting positions

Examples

#load("data/x_l.RData")
catNum3(x_l)

HTGM3D documentation built on June 8, 2025, 11:06 a.m.