pruneCatGenes: pruneCatGenes
In HTGM3D: Three Dimensional High Throughput 'GoMiner'
pruneCatGenes R Documentation
pruneCatGenes
Description
eliminate those categories to which no genes map
Usage
pruneCatGenes(m, mn = 2, mx = 200)
Arguments
m
the return value of catGenes()
mn
integer min category size threshold passed to trimGOGOA3()
mx
integer max category size threshold passed to trimGOGOA3()
Value
returns pruned version of matrix m
Examples
#load("data/x_cg.RData")
m<-pruneCatGenes(x_cg,2,200)
HTGM3D documentation built on June 8, 2025, 11:06 a.m.
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| pruneCatGenes | R Documentation |
pruneCatGenes
Description
eliminate those categories to which no genes map
Usage
pruneCatGenes(m, mn = 2, mx = 200)
Arguments
m |
the return value of catGenes() |
mn |
integer min category size threshold passed to trimGOGOA3() |
mx |
integer max category size threshold passed to trimGOGOA3() |
Value
returns pruned version of matrix m
Examples
#load("data/x_cg.RData")
m<-pruneCatGenes(x_cg,2,200)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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