Description Usage Arguments Details Author(s) References See Also Examples
This function calculates the diversity profiles and generates a line plot. You can get either one of the diversity index plot, richness (q=0), exponential Shannon entropy (q=1), and heterozygosity related measure of diversity (q=2), or all of them.
1 |
x |
The input genetic files, genepop format |
q |
The order of Hill numbers, q =0,1,2, or "all".If q= "all", this will return plot including three diversities. |
ncode |
The coding type of your data. |
Result returns a diversity plot.
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Marcon, E., & Herault, B. (2015). entropart: An R package to measure and partition diversity. Journal of Statistical Software, 67(8).
Gaggiotti, O. E., Chao, A., Peres-Neto, P., Chiu, C. H., Edwards, C., Fortin, M. J., ... & Selkoe, K. A. (2018). Diversity from genes to ecosystems: A unifying framework to study variation across biological metrics and scales. Evolutionary Applications.
qD
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