GetExampleData: Get the example data

In ICDS: Identification of Cancer Dysfunctional Subpathway with Omics Data

Description

Get the example data of test package for litte trials.

Usage

GetExampleData(exampleData)

Arguments

exampleData

A character, should be one of "exp_data", "meth_data", "cnv_data", "amp_gene", "del_gene" ,"label1","label2","zz","exp.p","meth.p","cnv.p"and "pathdata".

Details

The function getExampleData(ExampleData = "exp.p)") obtains a vector of lncRNAs confirmed to be related with breast cancer. The function getExampleData(ExampleData = "Profile") obtains the expression pr

References

Subramanian, A., Tamayo, P., Mootha, V.K., Mukherjee, S., Ebert, B.L., Gillette, M.A., Paulovich, A., Pomeroy, S.L., Golub, T.R., Lander, E.S. et al. (2005) Gene set enrichment analysis: a knowledgebased approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci U S A, 102, 15545-15550.

ICDS documentation built on July 15, 2021, 5:06 p.m.