FSA_msp_annotator: FSA msp annotator

In IDSL.FSA: Fragmentation Spectra Analysis (FSA)

FSA msp annotator

Description

This function arranges the parameters for the annotation process

Usage

FSA_msp_annotator(PARAM_SPEC, libFSdb, address_input_msp, output_path,
allowedVerbose = TRUE)

Arguments

PARAM_SPEC	a parameter driven from the 'FSA_SpectraSimilarity_xlsxAnalyzer' module.
libFSdb	a converted .msp library reference files (FSDB) using the 'msp2FSdb' module
address_input_msp	address of the .msp files
output_path	output path
allowedVerbose	c(TRUE, FALSE). A 'TRUE' allowedVerbose provides messages about the flow of the function.

Value

A dataframe of matched annotated spectra stored in the output directory.

IDSL.FSA documentation built on July 9, 2023, 6:45 p.m.