plotFSdb2SpectraCore: plot spectra from FSdb core

In IDSL.FSA: Fragmentation Spectra Analysis (FSA)

plot spectra from FSdb core

Description

This function plots spectra figures from FSdb objects generated using the 'msp2FSdb' function.

Usage

plotFSdb2SpectraCore(FSdb, index)

Arguments

FSdb	FSdb
index	index

Value

spectra_figure object

Examples

## To create the FSdb object
temp_wd <- tempdir() # just a temporary folder
path_extdata <- system.file("extdata", package = "IDSL.FSA")
MSPfile <- c("Kynurenine_Kynurenic_acid.msp")
file.copy(from = paste0(path_extdata, "/", MSPfile), to = temp_wd)
FSdb <- msp2FSdb(path = temp_wd, MSPfile)
## To plot spectra
index <- 1
plotFSdb2SpectraCore(FSdb, index)

IDSL.FSA documentation built on July 9, 2023, 6:45 p.m.