transformScores: Transform Raw Scores to Fractions
In IOBR: Immune Oncology Biological Research
transformScores R Documentation
Transform Raw Scores to Fractions
Description
Transforms raw xCell scores to estimated cell fractions.
Usage
transformScores(scores, fit.vals, scale = TRUE, fn = NULL)
Arguments
scores
Raw scores from rawEnrichmentAnalysis.
fit.vals
Calibration values from spill object.
scale
Logical indicating whether to use scaling. Default is 'TRUE'.
fn
Character string for saving scores. Default is 'NULL'.
Value
Transformed xCell scores matrix.
IOBR documentation built on May 30, 2026, 5:07 p.m.
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| transformScores | R Documentation |
Transform Raw Scores to Fractions
Description
Transforms raw xCell scores to estimated cell fractions.
Usage
transformScores(scores, fit.vals, scale = TRUE, fn = NULL)
Arguments
scores |
Raw scores from rawEnrichmentAnalysis. |
fit.vals |
Calibration values from spill object. |
scale |
Logical indicating whether to use scaling. Default is 'TRUE'. |
fn |
Character string for saving scores. Default is 'NULL'. |
Value
Transformed xCell scores matrix.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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