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README.md
In JAGUAR: Joint Analysis of Genotype and Group-Specific Variability Using a Novel Score Test Approach to Map Expression Quantitative Trait Loci (eQTL)
JAGUAR
This is an R-package to implement a novel score test method to map group-specific expression quantitative trait loci (eQTL) that tests for the additive genotypic effect and variability among tissues in a mixed effects model framework. This approach implicitly assumes that the effect of a SNP on gene expression could be in different directions in different tissues. The newest version appliesa closed-form expression of our model and speeds up the computations using templated C++ linear algebra library, Armadillo.
This package is free software, you can redistribute it and/or modify it under the terms of the GNU General Public License.The GNU General Public License does not permit this software to be redistributed in proprietary programs. We are providing no guarantees with this software.
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JAGUAR documentation built on May 2, 2019, 3:26 p.m.
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JAGUAR
This is an R-package to implement a novel score test method to map group-specific expression quantitative trait loci (eQTL) that tests for the additive genotypic effect and variability among tissues in a mixed effects model framework. This approach implicitly assumes that the effect of a SNP on gene expression could be in different directions in different tissues. The newest version appliesa closed-form expression of our model and speeds up the computations using templated C++ linear algebra library, Armadillo.
This package is free software, you can redistribute it and/or modify it under the terms of the GNU General Public License.The GNU General Public License does not permit this software to be redistributed in proprietary programs. We are providing no guarantees with this software.
Try the JAGUAR package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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