| cis_eqtl | An internal C++ function |
| GENEapply | An internal C++ function |
| jag_fun | An internal C++ function |
| jagSIM | An internal C++ function |
| jaguar_cis | Perform cis-eQTL analysis |
| jaguar_example | Simulated multi-tissue eQTL data |
| jaguar_gwa | Perform genome-wide analysis |
| JAGUAR-package | Joint analysis of genotype and group-specific variability... |
| jaguar_plotqtl | Plotting the eQTL results |
| jaguar_process | Obtain significant gene-SNP pairs based on a predetermined... |
| jaguar_sim | Run null or power simulations |
| jaguar_slice | Slice gene expression data into multiple partitions |
| rowsumscpp | An internal C++ function |
| vcSIM | An internal C++ function |
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