KODAMA: Knowledge Discovery by Accuracy Maximization

An unsupervised and semi-supervised learning algorithm that performs feature extraction from noisy and high-dimensional data.

Author
Stefano Cacciatore, Leonardo Tenori, Claudio Luchinat, Phillip R. Bennett, and David A. MacIntyre
Date of publication
2016-10-20 00:28:45
Maintainer
Stefano Cacciatore <tkcaccia@gmail.com>
License
GPL (>= 2)
Version
1.1

View on CRAN

Man pages

core_cpp
Maximization of Cross-Validateed Accuracy Methods
dinisurface
Ulisse Dini Data Set Generator
floyd
Find Shortest Paths Between All Nodes in a Graph
helicoid
Helicoid Data Set Generator
knn.double.cv
Cross-Validation with k-Nearest Neighbors algorithm.
knn.kodama
k-Nearest Neighbors Classifier.
KODAMA
Knowledge Discovery by Accuracy Maximization
k.test
K-Test of Statistical Association
loads
Variable Ranking
lymphoma
Lymphoma Gene Expression Dataset
mcplot
Evaluation of the Monte Carlo accuracy results
MetRef
Nuclear Magnetic Resonance Spectra of Urine Samples
normalization
Normalization methods
pls.double.cv
Cross-Validation with PLS-DA.
pls.kodama
Partial Least Squares regression.
scaling
Scaling methods
spirals
Spirals Data Set Generator
swissroll
Swiss Roll Data Set Generator
transformy
Conversion Classification Vector to Matrix
USA
State of the Union Data Set

Files in this package

KODAMA
KODAMA/inst
KODAMA/inst/doc
KODAMA/inst/doc/KODAMA.R
KODAMA/inst/doc/KODAMA.Rmd
KODAMA/inst/doc/KODAMA.pdf
KODAMA/src
KODAMA/src/kd_util.cpp
KODAMA/src/bd_fix_rad_search.cpp
KODAMA/src/Makevars
KODAMA/src/kd_split.cpp
KODAMA/src/prova.cpp
KODAMA/src/kd_util.h
KODAMA/src/kd_pr_search.cpp
KODAMA/src/pr_queue_k.h
KODAMA/src/NN.h
KODAMA/src/ANN
KODAMA/src/ANN/ANNperf.h
KODAMA/src/ANN/ANN.h
KODAMA/src/ANN/ANNx.h
KODAMA/src/bd_tree.cpp
KODAMA/src/bd_tree.h
KODAMA/src/ANN.cpp
KODAMA/src/kd_pr_search.h
KODAMA/src/pr_queue.h
KODAMA/src/kd_split.h
KODAMA/src/kd_tree.h
KODAMA/src/bd_search.cpp
KODAMA/src/bd_pr_search.cpp
KODAMA/src/kd_fix_rad_search.cpp
KODAMA/src/kd_dump.cpp
KODAMA/src/Makevars.win
KODAMA/src/RcppExports.cpp
KODAMA/src/brute.cpp
KODAMA/src/kd_fix_rad_search.h
KODAMA/src/kd_search.cpp
KODAMA/src/kd_tree.cpp
KODAMA/src/kd_search.h
KODAMA/NAMESPACE
KODAMA/data
KODAMA/data/USA.RData
KODAMA/data/lymphoma.RData
KODAMA/data/MetRef.RData
KODAMA/data/datalist
KODAMA/R
KODAMA/R/preprocessing.R
KODAMA/R/RcppExports.R
KODAMA/R/KOD.R
KODAMA/R/datasets.R
KODAMA/vignettes
KODAMA/vignettes/dinisurface.pdf
KODAMA/vignettes/helicoid.pdf
KODAMA/vignettes/kk2.pdf
KODAMA/vignettes/pca.pdf
KODAMA/vignettes/iris_knn_5.pdf
KODAMA/vignettes/KODAMA.Rmd
KODAMA/vignettes/kk3.pdf
KODAMA/vignettes/mcplot.pdf
KODAMA/vignettes/swissroll.pdf
KODAMA/vignettes/iris.pdf
KODAMA/vignettes/kk5.pdf
KODAMA/vignettes/kk1.pdf
KODAMA/vignettes/kk4.pdf
KODAMA/vignettes/spirals.pdf
KODAMA/MD5
KODAMA/build
KODAMA/build/vignette.rds
KODAMA/DESCRIPTION
KODAMA/man
KODAMA/man/k.test.Rd
KODAMA/man/lymphoma.Rd
KODAMA/man/scaling.Rd
KODAMA/man/loads.Rd
KODAMA/man/spirals.Rd
KODAMA/man/helicoid.Rd
KODAMA/man/USA.Rd
KODAMA/man/mcplot.Rd
KODAMA/man/floyd.Rd
KODAMA/man/KODAMA.Rd
KODAMA/man/pls.kodama.Rd
KODAMA/man/MetRef.Rd
KODAMA/man/core_cpp.Rd
KODAMA/man/dinisurface.Rd
KODAMA/man/transformy.Rd
KODAMA/man/knn.kodama.Rd
KODAMA/man/normalization.Rd
KODAMA/man/swissroll.Rd
KODAMA/man/pls.double.cv.Rd
KODAMA/man/knn.double.cv.Rd