Description Usage Arguments Value Examples
visualize()
generates a graph. It is used to intuitively and vividly display the layout of gene X, Y and W.
1 |
graph |
The igraph object of gene network. |
kernel.result |
The result of graph.kd which finds genes W of a gene X. |
x |
The gene the plot is generated for. |
k |
The degree of the neighborhood of X. |
cutoff |
A threshold to filter gene W. |
path |
The path where the result graph is saved to. The default path is the original path of input graph. |
a graph of gene X, Y and W
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