LncPriCNet: Prioritizing Candidate LncRNAs Based on a Composite Multi-Level Network

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Prioritizing the disease lncRNAs based on random walking on a composite Multi-level network.

Author
Qianlan Yao
Date of publication
2016-06-03 19:59:33
Maintainer
Qianlan Yao <yaoqianlan@yahoo.com>
License
GPL (>= 2)
Version
1.0

View on CRAN

Man pages

DiseaseInfList
All Known Disease Information.
getCoExpGeneofLncs
Get Co-expressed Genes of LncRNAs
getDiseaseInf
Get All Disease Information based on phenotype id (OMIM Id)...
getTopDiseaseLncRNAs
Get the Disease Risk LncRNAs
GLNetExample
An Example of Gene-LncRNA Network.
GNetExample
An Example of Gene Network.
LncPriCNet-package
Description of LncPriNet Package
LNetExample
An Example of LncRNA Network.
PGNetExample
An Example of Phenotype-gene Network.
PLNetExample
An Example of Phenotype-lncRNA Network.
PNetExample
An Example of Phenotype Network.

Files in this package

LncPriCNet
LncPriCNet/NAMESPACE
LncPriCNet/data
LncPriCNet/data/PNetExample.rda
LncPriCNet/data/PGNetExample.rda
LncPriCNet/data/GLNetExample.rda
LncPriCNet/data/GNetExample.rda
LncPriCNet/data/PLNetExample.rda
LncPriCNet/data/LNetExample.rda
LncPriCNet/data/DiseaseInfList.rda
LncPriCNet/R
LncPriCNet/R/getSeed.R
LncPriCNet/R/getTopDiseaseLncRNAs.R
LncPriCNet/R/getCandidates.R
LncPriCNet/R/getCoExpGeneofLncs.R
LncPriCNet/R/getDiseaseInf.R
LncPriCNet/R/getnW.R
LncPriCNet/R/rwr.R
LncPriCNet/R/getPriList.R
LncPriCNet/MD5
LncPriCNet/DESCRIPTION
LncPriCNet/man
LncPriCNet/man/PLNetExample.Rd
LncPriCNet/man/getDiseaseInf.Rd
LncPriCNet/man/GNetExample.Rd
LncPriCNet/man/PGNetExample.Rd
LncPriCNet/man/LNetExample.Rd
LncPriCNet/man/getTopDiseaseLncRNAs.Rd
LncPriCNet/man/LncPriCNet-package.Rd
LncPriCNet/man/DiseaseInfList.Rd
LncPriCNet/man/PNetExample.Rd
LncPriCNet/man/getCoExpGeneofLncs.Rd
LncPriCNet/man/GLNetExample.Rd