data_filtering: Data Filtering

In MACP: Macromolecular Assemblies from Co-Elution Profile (MACP)

Data Filtering

Description

This function removes proteins for which peptide only detected in one fraction (i.e., "one-hit-wonders") across the co-elution table, common contaminants (e.g., keratins) only for mouse and human organisms and frequent flyers.

Usage

data_filtering(x)

Arguments

x	A data matrix object with rows including proteins and fractions along the columns.

Details

data_filtering

Value

Filtered matrix.

Author(s)

Matineh Rahmatbakhsh, [e-mail]

Examples

# Load the co-elution data
data("exampleData")
# Perform raw data pre-processing
datOut <- data_filtering(exampleData)

MACP documentation built on March 7, 2023, 7:42 p.m.