coral.stress: RT-qPCR of stress response in coral Porites astreoides

In MCMC.qpcr: Bayesian Analysis of qRT-PCR Data

Description

Timepoint one is one day of heat-light stress; timepoint two is recovery from it the next day. Controls are the fragments never exposed to stress. Individual denotes a coral colony that yielded several fragments for different treatments.

Usage

data(coral.stress)

Format

A data frame with 64 observations on the following 19 variables.

sample

a numeric vector

individual

a factor with levels s1 s12 s13 s15 s2 s4 s5 s8

condition

a factor with levels control heat

timepoint

a factor with levels one two

hsp16

a numeric vector

actin

a numeric vector

adk

a numeric vector

c3

a numeric vector

chrom

a numeric vector

clect

a numeric vector

eif3h

a numeric vector

g3pdh

a numeric vector

gsp2

a numeric vector

hsp60

a numeric vector

hsp90

a numeric vector

nd5

a numeric vector

rpl11

a numeric vector

spon2

a numeric vector

ubl3

a numeric vector

Examples

data(coral.stress)

Example output

Loading required package: MCMCglmm
Loading required package: Matrix
Loading required package: coda
Loading required package: ape
Loading required package: ggplot2

MCMC.qpcr documentation built on March 31, 2020, 5:22 p.m.