well_barchart: Well Bar chart

In MEAanalysis: Analyse and Visualise Multi Electrode Array Burst Data

Well Bar chart

Description

Function creates a bar chart of calculated MEA parameters by well for a given time interval and recording.

Usage

well_barchart(
  data = output_table,
  well_parameter,
  well_filter = "A1|A2|A3|A4|A5|A6|B1|B2|B3|B4|B5|B6|C1|C2|C3|C4|C5|C6|D1|D2|D3|D4|D5|D6",
  statistic = se
)

Arguments

data	Dataset containing electrode burst data and calculated MEA parameter. Use create_electrode_dataset and well parameter functions to preprocess data before use in this function (i.e., well_burst_duration, well_mean_burst_ISI, well_number_of_bursts, well_spikes_per_burst).
well_parameter	Include "number_of_bursts"/ "burst_duration"/ "spikes_per_burst"/ "mean_burst_ISI" to determine the parameter visualised in the barchart.
well_filter	Argument can be used to filter for specific MEA wells to include in the barchart.
statistic	Include "se" or "sd" to determine whether bar chart error bars represent the standard error or standard deviation of the mean.

Value

A bar chart of calculated MEA parameters by single electrode for a given time interval and recording.

Examples

p <- well_barchart(data = input_well_barchart,
              well_parameter = "burst_duration",
              well_filter = "A1|A2|A3|A4",
              statistic = se)

p <- well_barchart(data = input_well_barchart,
              well_parameter = "spikes_per_burst",
              well_filter = "A1|A2|A3|A4",
              statistic = se)

p <- well_barchart(data = input_well_barchart,
              well_parameter = "mean_burst_ISI",
              well_filter = "A1|A2|A3|A4",
              statistic = se)

p <- well_barchart(data = input_well_barchart,
              well_parameter = "number_of_bursts",
              well_filter = "A1|A2|A3|A4",
              statistic = se)

MEAanalysis documentation built on June 8, 2025, 1:27 p.m.