well_mean_burst_ISI: Well Mean Burst ISI

In MEAanalysis: Analyse and Visualise Multi Electrode Array Burst Data

Well Mean Burst ISI

Description

Function reads in electrode burst list data and creates new columns with the mean, SD, and SEM mean ISI within a burst (sec) recorded for each well (within the specified time interval and recording).

Usage

well_mean_burst_ISI(
  data = output_table,
  time_lower_bound = 0,
  time_upper_bound = Inf,
  recording_identifier
)

Arguments

data	Electrode burst list dataset preprocessed using the create_electrode_dataset function.
time_lower_bound	Define lower bound of time interval for which to calculate the MEA parameter (seconds).
time_upper_bound	Define upper bound of time interval for which to calculate the MEA parameter (seconds).
recording_identifier	Define recording for which to calculate the MEA parameter. Use recording_identifier defined in create_electrode_dataset function.

Value

An electrode burst list table with three additional columns (mean, SD and SEM mean ISI within a burst (sec) recorded for each well within the specified time interval and recording).

Examples

output_MEA_data <- well_mean_burst_ISI(data = input_MEA_data,
                                       time_lower_bound = 0,
                                       time_upper_bound = 30,
                                       recording_identifier = "burst_recording_1")

MEAanalysis documentation built on June 8, 2025, 1:27 p.m.