A simulation modeling framework which significantly extends capabilities from the 'MGDrivE' simulation package via a new mathematical and computational framework based on stochastic Petri nets. For more information about 'MGDrivE', see our publication: Sánchez et al. (2019) <doi:10.1111/2041-210X.13318> Some of the notable capabilities of 'MGDrivE2' include: incorporation of human populations, epidemiological dynamics, time-varying parameters, and a continuous-time simulation framework with various sampling algorithms for both deterministic and stochastic interpretations. 'MGDrivE2' relies on the genetic inheritance structures provided in package 'MGDrivE', so we suggest installing that package initially.
Package details |
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Author | Sean L. Wu [aut], Jared B. Bennett [aut], Héctor Manuel Sánchez Castellanos [ctb], Tomás M. León [ctb], Andrew J. Dolgert [ctb], John M. Marshall [aut], Agastya Mondal [aut, cre] |
Maintainer | Agastya Mondal <amondal13@gmail.com> |
License | GPL-3 |
Version | 2.1.0 |
URL | https://marshalllab.github.io/MGDrivE/docs_v2/index.html https://www.marshalllab.com/ |
Package repository | View on CRAN |
Installation |
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