base_MQ: Base Summary Function

In MGDrivE2: Mosquito Gene Drive Explorer 2

Base Summary Function

Description

This function does the actual calculations for summarize_stats_CSV. It calculates mean and quantiles, writing output to the appropriate folder.

Usage

base_MQ(
  fList,
  oDir,
  sName,
  nodeNames,
  nNodes,
  genos,
  nGenos,
  times,
  nTimes,
  num_repss,
  mean,
  quantiles,
  oDepth
)

Arguments

fList	File list, all files for this stage, organized by repetition
oDir	Output directory
sName	Stage signifier
nodeNames	Properly formatted vector of node names for printing
nNodes	Number of nodes in the simulation
genos	Vector of genotypes for the header
nGenos	Number of genotypes
times	Vector of sampling times
nTimes	Number of sampled times
num_repss	Number of repetitions from the simulation
mean	Boolean, calculate mean or not
quantiles	Vector of quantiles to calculate, or NULL
oDepth	Max(1, number of quantiles)

Value

None

MGDrivE2 documentation built on March 7, 2023, 6:44 p.m.