Files in MHCtools
Analysis of MHC Data in Non-Model Species
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
LICENSE
R/PapaDiv_func_20230630.R
R/NestTablesXL_func_20221012.R
R/CreateSamplesFas_func_20230321.R
R/ClusterMatch_func_20210910.R
R/replicates_table.R
R/sequence_table.R
R/sequence_table_hplt.R
R/k_summary_table.R
R/CreateHpltOccTable_func_20221010.R
R/z3_matrix.R
R/hplt_occurrence_matrix.R
R/nest_table.R
R/parents_table.R
R/HpltFind_func_20230321.R
R/sequence_table_fas.R
R/z5_matrix.R
R/ReplMatch_func_20230321.R
R/GetReplTable_func_20200914.R
R/GetHpltStats_func_20200915.R
R/DistCalc_func_20230707.R
R/sequence_table_repl.R
R/BootKmeans_func_20210910.R
R/zzz.R
R/z1_matrix.R
R/CreateFas_func_20230321.R
R/GetHpltTable_func_20200915.R
R/z4_matrix.R
R/HpltMatch_func_20230322.R
R/z2_matrix.R
R/GetReplStats_func_20200914.R
inst/extdata/ClusterMatch/Kclusters_model_8_20210913.RData
inst/extdata/ClusterMatch/Kclusters_model_6_20210913.RData
inst/extdata/ClusterMatch/Kclusters_model_5_20210913.RData
inst/extdata/ClusterMatch/Kclusters_model_1_20210913.RData
inst/extdata/ClusterMatch/Kclusters_model_4_20210913.RData
inst/extdata/ClusterMatch/Kclusters_model_10_20210913.RData
inst/extdata/ClusterMatch/Kclusters_model_2_20210913.RData
inst/extdata/ClusterMatch/Kclusters_model_7_20210913.RData
inst/extdata/ClusterMatch/Kclusters_model_3_20210913.RData
inst/extdata/ClusterMatch/Kclusters_model_9_20210913.RData
inst/extdata/ReplMatchOut/Repl_set_9_20200915.Rds
inst/extdata/ReplMatchOut/Repl_set_7_20200915.Rds
inst/extdata/ReplMatchOut/Repl_set_3_20200915.Rds
inst/extdata/ReplMatchOut/Repl_set_2_20200915.Rds
inst/extdata/ReplMatchOut/Repl_set_1_20200915.Rds
inst/extdata/ReplMatchOut/Repl_set_4_20200915.Rds
inst/extdata/ReplMatchOut/Repl_set_6_20200915.Rds
inst/extdata/ReplMatchOut/Repl_set_10_20200915.Rds
inst/extdata/ReplMatchOut/Repl_set_5_20200915.Rds
inst/extdata/ReplMatchOut/Repl_set_8_20200915.Rds
inst/extdata/HpltFindOut/Haplotypes_nest8_20221018.Rds
inst/extdata/HpltFindOut/Haplotypes_nest6_20221018.Rds
inst/extdata/HpltFindOut/Haplotypes_nest7_20221018.Rds
inst/extdata/HpltFindOut/Haplotypes_nest10_20221018.Rds
inst/extdata/HpltFindOut/Haplotypes_nest3_20221018.Rds
inst/extdata/HpltFindOut/Haplotypes_nest9_20221018.Rds
inst/extdata/HpltFindOut/Haplotypes_nest1_20221018.Rds
inst/extdata/HpltFindOut/Haplotypes_nest4_20221018.Rds
inst/extdata/HpltFindOut/Haplotypes_nest5_20221018.Rds
inst/extdata/HpltFindOut/Haplotypes_nest2_20221018.Rds
data/z5_matrix.rda
data/sequence_table.rda
data/sequence_table_repl.rda
data/k_summary_table.rda
data/z2_matrix.rda
data/nest_table.rda
data/z3_matrix.rda
data/hplt_occurrence_matrix.rda
data/sequence_table_hplt.rda
data/sequence_table_fas.rda
data/replicates_table.rda
data/z4_matrix.rda
data/parents_table.rda
data/z1_matrix.rda
man/ReplMatch.Rd
man/CreateSamplesFas.Rd
man/z5_matrix.Rd
man/hplt_occurrence_matrix.Rd
man/HpltMatch.Rd
man/GetReplStats.Rd
man/HpltFind.Rd
man/CreateHpltOccTable.Rd
man/sequence_table_repl.Rd
man/sequence_table_hplt.Rd
man/GetHpltTable.Rd
man/PapaDiv.Rd
man/z2_matrix.Rd
man/replicates_table.Rd
man/NestTablesXL.Rd
man/nest_table.Rd
man/DistCalc.Rd
man/sequence_table.Rd
man/GetHpltStats.Rd
man/sequence_table_fas.Rd
man/CreateFas.Rd
man/GetReplTable.Rd
man/z1_matrix.Rd
man/k_summary_table.Rd
man/z4_matrix.Rd
man/z3_matrix.Rd
man/BootKmeans.Rd
man/ClusterMatch.Rd
man/parents_table.Rd
