bias: Calculate MIC bias

In MIC: Analysis of Antimicrobial Minimum Inhibitory Concentration Data

Calculate MIC bias

Description

Calculate the bias between two AMR::mic vectors. The bias is calculated as the percentage of test MICs that are above the gold standard MICs minus the percentage of test MICs that are below the gold standard MICs.

Usage

bias(gold_standard, test)

Arguments

gold_standard	AMR::mic vector
test	AMR::mic vector

Value

numeric value

References

International Organization for Standardization. ISO 20776-2:2021 Available from: https://www.iso.org/standard/79377.html

Examples

gold_standard <- c("<0.25", "8", "64", ">64")
test <- c("<0.25", "2", "16", "64")
bias(gold_standard, test)

MIC documentation built on April 12, 2025, 2:26 a.m.