snpData: Example SNP data

In MPR.genotyping: Maximum Parsimony of Recombination to Infer Parental Genotypes

Description

A total of 238 RILs developed from the cross be- tween Zhenshan 97 and Minghui 63 were resequenced with an Illumina Genome Analyzer II using the bar-coded multiplexed sequencing approach

Usage

data("snpData")

Format

The format is: chr [1:15795, 1:238] "A" NA NA NA NA NA NA "G" NA NA NA NA NA ... - attr(*, "dimnames")=List of 2 ..$ : chr [1:15795] "0500000526A" "0500000556A" "0500000559G" "0500000591G" ... ..$ : chr [1:238] "MZ001" "MZ002" "MZ003" "MZ004" ...

Details

SNP data format as it

Source

http://www.ncpgr.cn/supplements/MPR_genotyping/MPR_genotyping.tar.gz

Examples

# load data
data(snpData)

MPR.genotyping documentation built on May 2, 2019, 3:26 a.m.