genotypeCallsBayes: genotype Calls by Bayes

In MPR.genotyping: Maximum Parsimony of Recombination to Infer Parental Genotypes

Description

After globalMPRRefine, you should use Bayes to call final genotype.

Usage

genotypeCallsBayes(ALLELE.num, errorRate = 5e-04, eps = 1e-10, 
		maxIterate = 100, verbose = FALSE)

Arguments

ALLELE.num	one result of globalMPRRefine
errorRate	errorRate
eps	eps
maxIterate	maxIterate to control running time
verbose	choose to show details

See Also

globalMPRRefine

Examples

ALLELE.num=matrix(c(100,1,
					50,55,
					89,2,
					1,101,
					0,78),5,3,byrow=TRUE)
genotypeCallsBayes(ALLELE.num)

MPR.genotyping documentation built on May 2, 2019, 3:26 a.m.