GetExampleData: Get the example data

In MiRSEA: 'MicroRNA' Set Enrichment Analysis

Get the example data

Description

Get the example data.

Usage

  GetExampleData(exampleData)
  

Arguments

exampleData

A character string, must be one of "dataset", "class.labels" , "miRList","p_value"and "p2miR".

Details

The function GetExampleData(exampleData="dataset") obtains miRNA expression dataset from the environment variable envData.

The function GetExampleData(exampleData="class.labels") obtains class labels from the environment variable envData.

The function GetExampleData(exampleData="miRList") obtains the drawing parameters of a miRNA List from the environment variable envData.

The function GetExampleData(exampleData="p_value") obtains the weighting matrix from the environment variable envData.

The function GetExampleData(exampleData="p2miR") obtains the correlation profile between kegg pathways and each human miRNA from the environment variable envData.

Author(s)

Junwei [e-mail],Siyao Liu [e-mail]

Examples

## Not run: 

#obtain the gene expression dataset.
dataset<-GetExampleData(exampleData="dataset")


#obtain the class labels.
class.labels<-GetExampleData(exampleData="class.labels")

#obtain the drawing parameters of a miRNA List
miRList<-GetExampleData(exampleData="miRList")


#obtain the weighting matrix 
p_value<-GetExampleData(exampleData="p_value")

#obtain the correlation profile
p2miR<-GetExampleData(exampleData="p2miR")



## End(Not run)

MiRSEA documentation built on May 29, 2024, 4:36 a.m.