API for MicroMoB
Discrete Time Simulation of Mosquito-Borne Pathogen Transmission
| Global functions | |
|---|---|
| MicroMoB | Man page |
| MicroMoB-package | Man page |
| api_clock_tick | Source code |
| api_config_global | Man page Source code |
| api_get_output_adult | Source code |
| api_get_output_aqua | Source code |
| api_get_parameters_adult | Source code |
| api_get_parameters_aqua | Source code |
| api_get_parameters_global | Source code |
| api_setup_adult | Source code |
| api_setup_adult_parameters | Source code |
| api_setup_aqua | Source code |
| api_setup_aqua_parameters | Source code |
| api_setup_global_parameters | Source code |
| api_setup_model_object | Source code |
| api_step_adult | Source code |
| api_step_aqua | Source code |
| approx_equal | Man page Source code |
| compute_H | Man page Source code |
| compute_H.MOI | Man page Source code |
| compute_H.SIP | Man page Source code |
| compute_H.SIR | Man page Source code |
| compute_H.SIS | Man page Source code |
| compute_O | Man page Source code |
| compute_O.trace | Man page Source code |
| compute_Psi | Man page Source code |
| compute_Psi.MOI | Man page Source code |
| compute_Psi.SIP | Man page Source code |
| compute_Psi.SIR | Man page Source code |
| compute_Psi.SIS | Man page Source code |
| compute_Wd | Man page Source code |
| compute_Wd.trace | Man page Source code |
| compute_Z | Man page Source code |
| compute_Z.BQ | Man page Source code |
| compute_Z.RM | Man page Source code |
| compute_Z.trace | Man page Source code |
| compute_bloodmeal | Man page Source code |
| compute_bloodmeal_simple | Man page Source code |
| compute_emergents | Man page Source code |
| compute_emergents.BH | Man page Source code |
| compute_emergents.trace | Man page Source code |
| compute_emergents.trace_deterministic | Man page Source code |
| compute_emergents.trace_stochastic | Man page Source code |
| compute_f | Man page Source code |
| compute_f.BQ | Man page Source code |
| compute_f.RM | Man page Source code |
| compute_f.trace | Man page Source code |
| compute_oviposit | Man page Source code |
| compute_oviposit.BQ | Man page Source code |
| compute_oviposit.BQ_deterministic | Man page Source code |
| compute_oviposit.BQ_stochastic | Man page Source code |
| compute_oviposit.RM | Man page Source code |
| compute_oviposit.RM_deterministic | Man page Source code |
| compute_oviposit.RM_stochastic | Man page Source code |
| compute_oviposit.trace | Man page Source code |
| compute_q | Man page Source code |
| compute_q.BQ | Man page Source code |
| compute_q.RM | Man page Source code |
| compute_q.trace | Man page Source code |
| compute_wf | Man page Source code |
| compute_wf.MOI | Man page Source code |
| compute_wf.SIP | Man page Source code |
| compute_wf.SIR | Man page Source code |
| compute_wf.SIS | Man page Source code |
| compute_x | Man page Source code |
| compute_x.MOI | Man page Source code |
| compute_x.SIP | Man page Source code |
| compute_x.SIR | Man page Source code |
| compute_x.SIS | Man page Source code |
| compute_xd | Man page Source code |
| compute_xd.trace | Man page Source code |
| distribute | Man page Source code |
| divmod | Man page Source code |
| draw_multinom | Man page Source code |
| get_K_aqua_BH | Man page Source code |
| get_config_alternative_trace | Man page Source code |
| get_config_aqua_BH | Man page Source code |
| get_config_aqua_trace | Man page Source code |
| get_config_humans_MOI | Man page Source code |
| get_config_humans_SIR | Man page Source code |
| get_config_humans_SIS | Man page Source code |
| get_config_mosquito_RM | Man page Source code |
| get_config_mosquito_trace | Man page Source code |
| get_config_visitor_trace | Man page Source code |
| get_eip_mosquito_RM | Man page Source code |
| get_f_mosquito_RM | Man page Source code |
| get_kappa_mosquito_RM | Man page Source code |
| get_lambda_aqua_trace | Man page Source code |
| get_molt_aqua_BH | Man page Source code |
| get_nu_mosquito_RM | Man page Source code |
| get_p_mosquito_RM | Man page Source code |
| get_psi_mosquito_RM | Man page Source code |
| get_q_mosquito_RM | Man page Source code |
| get_surv_aqua_BH | Man page Source code |
| get_tmax | Man page Source code |
| get_tnow | Man page Source code |
| is_binary | Man page Source code |
| make_MicroMoB | Man page Source code |
| observe_pfpr | Man page Source code |
| observe_pfpr.SIP | Man page Source code |
| observe_pfpr.SIS | Man page Source code |
| output_aqua | Man page Source code |
| output_aqua.BH | Man page Source code |
| output_aqua.trace | Man page Source code |
| output_mosquitoes | Man page Source code |
| output_mosquitoes.RM | Man page Source code |
| output_mosquitoes.trace | Man page Source code |
| sample_stochastic_matrix | Man page Source code |
| sample_stochastic_vector | Man page Source code |
| set_K_aqua_BH | Man page Source code |
| set_eip_mosquito_RM | Man page Source code |
| set_f_mosquito_RM | Man page Source code |
| set_kappa_mosquito_RM | Man page Source code |
| set_lambda_aqua_trace | Man page Source code |
| set_molt_aqua_BH | Man page Source code |
| set_nu_mosquito_RM | Man page Source code |
| set_p_mosquito_RM | Man page Source code |
| set_psi_mosquito_RM | Man page Source code |
| set_q_mosquito_RM | Man page Source code |
| set_surv_aqua_BH | Man page Source code |
| setup_alternative_trace | Man page Source code |
| setup_aqua_BH | Man page Source code |
| setup_aqua_trace | Man page Source code |
| setup_humans_MOI | Man page Source code |
| setup_humans_SIP | Man page Source code |
| setup_humans_SIR | Man page Source code |
| setup_humans_SIS | Man page Source code |
| setup_mosquito_BQ | Man page Source code |
| setup_mosquito_RM | Man page Source code |
| setup_mosquito_trace | Man page Source code |
| setup_visitor_trace | Man page Source code |
| step_aqua | Man page Source code |
| step_aqua.BH | Man page Source code |
| step_aqua.BH_deterministic | Man page Source code |
| step_aqua.BH_stochastic | Man page Source code |
| step_aqua.trace | Man page Source code |
| step_humans | Man page Source code |
| step_humans.MOI | Man page Source code |
| step_humans.MOI_deterministic | Man page Source code |
| step_humans.MOI_stochastic | Man page Source code |
| step_humans.SIP | Man page Source code |
| step_humans.SIP_deterministic | Man page Source code |
| step_humans.SIP_stochastic | Man page Source code |
| step_humans.SIR | Man page Source code |
| step_humans.SIR_deterministic | Man page Source code |
| step_humans.SIR_stochastic | Man page Source code |
| step_humans.SIS | Man page Source code |
| step_humans.SIS_deterministic | Man page Source code |
| step_humans.SIS_stochastic | Man page Source code |
| step_mosquitoes | Man page Source code |
| step_mosquitoes.BQ | Man page Source code |
| step_mosquitoes.BQ_deterministic | Man page Source code |
| step_mosquitoes.BQ_stochastic | Man page Source code |
| step_mosquitoes.RM | Man page Source code |
| step_mosquitoes.RM_deterministic | Man page Source code |
| step_mosquitoes.RM_stochastic | Man page Source code |
| step_mosquitoes.trace | Man page Source code |
| strata_to_residency_counts | Man page Source code |
| strata_to_residency_proportion | Man page Source code |
| time_patch_varying_parameter | Man page Source code |
| time_varying_parameter | Man page Source code |
