Geneset.intersectSelection: Intersection over resulting gene sets of 'PathwaysIter'...

In MosaiClusteR: An Umbrella Framework for Multi-Source and Multi-Omics Clustering

Intersection over resulting gene sets of PathwaysIter function for a selection of objects

Description

Internal function of Geneset.intersect.

Usage

Geneset.intersectSelection(
  list.output,
  sign = 0.05,
  names = NULL,
  seperatetables = FALSE,
  separatepvals = FALSE
)

Arguments

list.output	The output of the PathwaysIter function.
sign	The significance level to be handled for cutting of the pathways. Default is 0.05.
names	Optional. Names of the methods. Default is NULL.
seperatetables	Logical. If TRUE, a separate element is created per cluster containing the pathways for each iteration. Default is FALSE.
separatepvals	Logical. If TRUE, the p-values of the each iteration of each pathway in the intersection is given. If FALSE, only the mean p-value is provided. Default is FALSE.

Examples

## Not run: 
Geneset.intersectSelection(MCF7_Paths_FandT,sign=0.05)

## End(Not run)

MosaiClusteR documentation built on Oct. 25, 2026, 1:08 a.m.