API for MosaiClusteR
An Umbrella Framework for Multi-Source and Multi-Omics Clustering
| Global functions | |
|---|---|
| .abc_gsize | Source code |
| .abc_zf | Source code |
| .absorb_small | Source code |
| .as_distm | Source code |
| .cramers_v | Source code |
| .ctsClusterSim | Source code |
| .deep_adam | Source code |
| .deep_ae_fit | Source code |
| .deep_cluster | Source code |
| .deep_encode | Source code |
| .deep_minmax | Source code |
| .deep_relu | Source code |
| .deep_sigmoid | Source code |
| .dn_from_datanugget | Source code |
| .kw_eta2 | Source code |
| .linkBasedSimilarity | Source code |
| .mc_pal | Source code |
| .mc_theme | Source code |
| .nemo_affinity | Source code |
| .onAttach | Source code |
| .solve_weight_c | Source code |
| .srsClusterSim | Source code |
| .weighted_ward | Source code |
| ABCdeep.SingleInMultiple | Man page Source code |
| ABCdist.SingleInMultiple | Man page Source code |
| ABCpp.SingleInMultiple | Man page Source code |
| ADC | Man page Source code |
| ADEC | Man page Source code |
| BinFeaturesPlot_MultipleData | Man page Source code |
| BinFeaturesPlot_SingleData | Man page Source code |
| BoxPlotDistance | Man page Source code |
| CEC | Man page Source code |
| CVAA | Man page Source code |
| CharacteristicFeatures | Man page Source code |
| ChooseCluster | Man page Source code |
| Cluster | Man page Source code |
| ClusterCols | Man page Source code |
| ClusterPlot | Man page Source code |
| ClusteringAggregation | Man page Source code |
| ColorPalette | Man page Source code |
| ColorsNames | Man page Source code |
| CompareInteractive | Man page Source code |
| ComparePlot | Man page Source code |
| CompareSilCluster | Man page Source code |
| CompareSvsM | Man page Source code |
| ConsensusClustering | Man page Source code |
| ContFeaturesPlot | Man page Source code |
| Cyclogram | Man page |
| DetermineWeight_SilClust | Man page Source code |
| DetermineWeight_SimClust | Man page Source code |
| DiffGenes | Man page Source code |
| DiffGenesSelection | Man page Source code |
| Distance | Man page Source code |
| Distance_v2 | Man page Source code |
| EHC | Man page Source code |
| EnsembleClustering | Man page Source code |
| EvidenceAccumulation | Man page Source code |
| FeatSelection | Man page Source code |
| FeaturesOfCluster | Man page Source code |
| FindCluster | Man page Source code |
| FindElement | Man page Source code |
| FindGenes | Man page Source code |
| Geneset.intersect | Man page Source code |
| Geneset.intersectSelection | Man page Source code |
| HBGF | Man page Source code |
| HeatmapPlot | Man page Source code |
| HeatmapSelection | Man page Source code |
| HierarchicalEnsembleClustering | Man page Source code |
| LUCID | Man page Source code |
| LabelCols | Man page Source code |
| LabelPlot | Man page Source code |
| LinkBasedClustering | Man page Source code |
| M_ABC | Man page Source code |
| M_ABCdeep | Man page Source code |
| M_ABCdist | Man page Source code |
| M_ABCdist.WC | Man page Source code |
| MosaiClusteR | Man page |
| MosaiClusteR-package | Man page |
| NEMO | Man page Source code |
| Normalization | Man page Source code |
| PathwayAnalysis | Man page Source code |
| Pathways | Man page Source code |
| PathwaysIter | Man page Source code |
| PathwaysSelection | Man page Source code |
| PlotPathways | Man page Source code |
| PreparePathway | Man page Source code |
| ProfilePlot | Man page Source code |
| ReorderToReference | Man page Source code |
| SNF | Man page Source code |
| SelectnrClusters | Man page Source code |
| SharedComps | Man page Source code |
| SharedGenesPathsFeat | Man page Source code |
| SharedSelection | Man page Source code |
| SharedSelectionLimma | Man page Source code |
| SharedSelectionMLP | Man page Source code |
| SimilarityHeatmap | Man page Source code |
| SimilarityMeasure | Man page Source code |
| TrackCluster | Man page Source code |
| WeightedClust | Man page Source code |
| Whclust | Man page Source code |
| Wkmeans | Man page Source code |
| WonM | Man page Source code |
| characterize_clusters | Man page Source code |
| cluster_agreement | Man page Source code |
| cluster_biology_panel | Man page Source code |
| cluster_k_sweep | Man page Source code |
| cluster_selection_plot | Man page Source code |
| clustering_concordance | Man page Source code |
| compare_clusterings | Man page Source code |
| compare_methods_plot | Man page Source code |
| count_coclustering_cpp | Source code |
| create_data_nuggets | Man page Source code |
| distanceheatmaps | Man page Source code |
| embedding_plot | Man page Source code |
| enriched_features | Man page Source code |
| f.clustABC.MultiSource | Man page Source code |
| intNMF | Man page Source code |
| mcpp_rf_sample | Source code |
| mcpp_sample_weighted_no_replace | Source code |
| mosaic_labels | Man page Source code |
| mosaic_sim | Man page Source code |
| mosaic_toy | Man page |
| nugget_cluster | Man page Source code |
| nugget_feature_weights | Man page Source code |
| plot_cluster_profile | Man page Source code |
| plot_pathways | Man page Source code |
| print.data_nugget | Source code |
| simulate_weighting_regime | Man page Source code |
| spectral_clustering | Man page Source code |
