Files in MosaiClusteR
An Umbrella Framework for Multi-Source and Multi-Omics Clustering
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
R/RcppExports.R
R/snf.r
R/plots-features.r
R/intnmf.R
R/aaa-globals.R
R/M_ABCdeep.R
R/cluster.R
R/linkbased.r
R/M_ABCdist_WC.R
R/hec.r
R/weightedclust.r
R/manuscript-viz.R
R/pathways-modern.R
R/distance.R
R/spectral.R
R/nuggets.R
R/consensus.r
R/lucid.R
R/data-sim.R
R/cec.r
R/plots-dendro.r
R/utils-characterize.r
R/ensemble-graph.r
R/aggregation.r
R/adc.r
R/pathways.r
R/simulate-weighting.R
R/ABCpp.R
R/MosaiClusteR-package.R
R/normalization.R
R/M_ABCdist.R
R/characterize.R
R/utils-selection.r
R/ABCdeep.R
R/utils-evaluation.R
R/utils-navigation.r
R/abc-helpers.R
R/zzz.R
R/ABCdist.R
R/nemo.R
R/plots-heatmap.r
R/nugget-clustering.R
R/voting.r
R/M_ABC.R
R/utils-compare.r
src/RcppExports.cpp
src/mcpp_sampling.cpp
inst/REFERENCES.bib
inst/CITATION
inst/doc/MosaiClusteR.html
inst/doc/MosaiClusteR.Rmd
inst/doc/MosaiClusteR.R
build/vignette.rds
build/partial.rdb
tests/testthat.R
tests/testthat/test-utils-compare.R
tests/testthat/test-plots-dendro.R
tests/testthat/test-nuggets.R
tests/testthat/test-utils-navigation.R
tests/testthat/test-aggregation.R
tests/testthat/test-abcdeep.R
tests/testthat/test-utils-characterize.R
tests/testthat/test-ensemble-graph.R
tests/testthat/test-reference-methods.R
tests/testthat/test-pathways.R
tests/testthat/test-m-abc.R
tests/testthat/test-utils-selection.R
tests/testthat/test-consensus.R
tests/testthat/test-voting.R
tests/testthat/test-plots-features.R
tests/testthat/test-adc.R
tests/testthat/test-weighting.R
tests/testthat/test-plots-heatmap.R
tests/testthat/test-core.R
tests/testthat/test-linkbased.R
vignettes/MosaiClusteR.Rmd
data/mosaic_toy.rda
man/characterize_clusters.Rd
man/cluster_selection_plot.Rd
man/PreparePathway.Rd
man/ReorderToReference.Rd
man/MosaiClusteR.Rd
man/PathwayAnalysis.Rd
man/nugget_cluster.Rd
man/ClusterPlot.Rd
man/enriched_features.Rd
man/M_ABCdeep.Rd
man/CompareSvsM.Rd
man/PlotPathways.Rd
man/DiffGenesSelection.Rd
man/mosaic_toy.Rd
man/ClusterCols.Rd
man/DiffGenes.Rd
man/Pathways.Rd
man/LinkBasedClustering.Rd
man/M_ABCdist.Rd
man/Geneset.intersect.Rd
man/DetermineWeight_SilClust.Rd
man/Geneset.intersectSelection.Rd
man/cluster_biology_panel.Rd
man/CEC.Rd
man/ABCpp.SingleInMultiple.Rd
man/EHC.Rd
man/nugget_feature_weights.Rd
man/WonM.Rd
man/clustering_concordance.Rd
man/plot_cluster_profile.Rd
man/ContFeaturesPlot.Rd
man/ClusteringAggregation.Rd
man/FindGenes.Rd
man/compare_clusterings.Rd
man/ColorsNames.Rd
man/cluster_k_sweep.Rd
man/Normalization.Rd
man/ADEC.Rd
man/f.clustABC.MultiSource.Rd
man/Whclust.Rd
man/spectral_clustering.Rd
man/M_ABC.Rd
man/BinFeaturesPlot_MultipleData.Rd
man/FeaturesOfCluster.Rd
man/FeatSelection.Rd
man/ConsensusClustering.Rd
man/SharedSelectionLimma.Rd
man/SelectnrClusters.Rd
man/ComparePlot.Rd
man/intNMF.Rd
man/ABCdeep.SingleInMultiple.Rd
man/FindCluster.Rd
man/HBGF.Rd
man/SharedComps.Rd
man/CompareSilCluster.Rd
man/CompareInteractive.Rd
man/mosaic_sim.Rd
man/plot_pathways.Rd
man/PathwaysSelection.Rd
man/BinFeaturesPlot_SingleData.Rd
man/LUCID.Rd
man/simulate_weighting_regime.Rd
man/ProfilePlot.Rd
man/PathwaysIter.Rd
man/SimilarityMeasure.Rd
man/SharedSelection.Rd
man/create_data_nuggets.Rd
man/SharedGenesPathsFeat.Rd
man/HeatmapSelection.Rd
man/CharacteristicFeatures.Rd
man/distanceheatmaps.Rd
man/TrackCluster.Rd
man/ADC.Rd
man/CVAA.Rd
man/compare_methods_plot.Rd
man/SimilarityHeatmap.Rd
man/mosaic_labels.Rd
man/ChooseCluster.Rd
man/HeatmapPlot.Rd
man/EvidenceAccumulation.Rd
man/LabelPlot.Rd
man/Cyclogram.Rd
man/HierarchicalEnsembleClustering.Rd
man/LabelCols.Rd
man/Wkmeans.Rd
man/DetermineWeight_SimClust.Rd
man/ABCdist.SingleInMultiple.Rd
man/ColorPalette.Rd
man/Distance.Rd
man/embedding_plot.Rd
man/FindElement.Rd
man/BoxPlotDistance.Rd
man/NEMO.Rd
man/M_ABCdist.WC.Rd
man/SharedSelectionMLP.Rd
man/SNF.Rd
man/Cluster.Rd
man/WeightedClust.Rd
man/cluster_agreement.Rd
man/EnsembleClustering.Rd
man/figures/framework.svg
