MultiSVData: RD Data
In MultiSV: MultiSV: an R package for identification of structural variations in multiple populations based on whole genome resequencing
Description
Author(s)
References
Description
The data set is read depth (RD) from six domestic populations including ugc355, ugc356,
ugc357, ugc358, ugc376, ugc377 and one wild (WB) population of pigs (SS10.2).
The reads for the populations are available from SRA accession number SRA057461.
RD from each population is in 1kb bins obtained after aligning the reads
from each population to SS10.2 reference genome assembly.
Author(s)
Khurram Maqbool
References
Rubin, C.-J., H.-J.Megens, A.Martinez Barrio, K.Maqbool, S. Sayyab,
D. Schwochow, C.Wang, Ö. Carlborg, P. Jern, C.B. Jørgensen, A.
L.Archibald, M. Fredholm, M. A. M. Groenen, and L.Andersson.
2012. Strong signatures of selection in the domestic pig genome.
Proc. Natl. Acad. Sci. USA 109:19529–19536, DOI: 10.1073/pnas.1217149109
MultiSV documentation built on May 2, 2019, 9:25 a.m.
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Description Author(s) References
Description
The data set is read depth (RD) from six domestic populations including ugc355, ugc356, ugc357, ugc358, ugc376, ugc377 and one wild (WB) population of pigs (SS10.2). The reads for the populations are available from SRA accession number SRA057461. RD from each population is in 1kb bins obtained after aligning the reads from each population to SS10.2 reference genome assembly.
Author(s)
Khurram Maqbool
References
Rubin, C.-J., H.-J.Megens, A.Martinez Barrio, K.Maqbool, S. Sayyab, D. Schwochow, C.Wang, Ö. Carlborg, P. Jern, C.B. Jørgensen, A. L.Archibald, M. Fredholm, M. A. M. Groenen, and L.Andersson. 2012. Strong signatures of selection in the domestic pig genome. Proc. Natl. Acad. Sci. USA 109:19529–19536, DOI: 10.1073/pnas.1217149109
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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