Files in NACHO
NanoString Quality Control Dashboard

MD5
NEWS.md README.md
NAMESPACE
DESCRIPTION
R/geometric_housekeeping.R R/qc_imaging.R R/format_tag_content.R R/qc_limit_detection.R R/factor_calculation.R R/read_tags.R R/print.R R/check_outliers.R R/geometric_probes.R R/qc_pca.R R/qc_features.R R/qc_rcc.R R/format_counts.R R/NACHO-package.R R/normalise_counts.R R/GSE74821.R R/norm_geo.R R/normalise.R R/load_rcc.R R/qc_positive_control.R R/geometric_mean.R R/read_rcc.R R/deploy.R R/probe_exclusion.R R/find_housekeeping.R R/visualise.R R/render.R R/autoplot.R R/utils.R R/norm_glm.R
inst/CITATION
inst/doc/NACHO.html
inst/doc/NACHO.R inst/doc/NACHO.Rmd inst/doc/NACHO-analysis.R
inst/doc/NACHO-analysis.html
inst/doc/NACHO-analysis.Rmd inst/app/app.R inst/app/utils.R
inst/app/www/nacho_hex.png
inst/app/www/about-hgf.md
inst/app/www/united-bootstrap.min.css
inst/app/www/about-lod.md inst/app/www/about-pf.md inst/app/www/about-fov.md inst/app/www/about-pcl.md inst/app/www/about-nacho.md inst/app/www/about-bd.md
build/vignette.rds
build/partial.rdb
tests/testthat.R tests/testthat/test-visualise.R tests/testthat/test-normalise.R tests/testthat/test-deploy.R tests/testthat/test-check_outliers.R tests/testthat/test-print.R tests/testthat/test-load_rcc.R tests/testthat/test-autoplot.R tests/testthat/test-render.R
tests/testthat/plexset_data/plexset_06_06.RCC
tests/testthat/plexset_data/plexset_11_11.RCC
tests/testthat/plexset_data/plexset_10_10.RCC
tests/testthat/plexset_data/plexset_07_07.RCC
tests/testthat/plexset_data/plexset_01_01.RCC
tests/testthat/plexset_data/plexset_05_05.RCC
tests/testthat/plexset_data/plexset_08_08.RCC
tests/testthat/plexset_data/plexset_09_09.RCC
tests/testthat/plexset_data/plexset_02_02.RCC
tests/testthat/plexset_data/plexset_04_04.RCC
tests/testthat/plexset_data/plexset_03_03.RCC
tests/testthat/plexset_data/plexset_12_12.RCC
tests/testthat/salmon_data/salmon_10_10.RCC
tests/testthat/salmon_data/salmon_03_03.RCC
tests/testthat/salmon_data/salmon_05_05.RCC
tests/testthat/salmon_data/salmon_12_12.RCC
tests/testthat/salmon_data/salmon_04_04.RCC
tests/testthat/salmon_data/salmon_02_02.RCC
tests/testthat/salmon_data/salmon_01_01.RCC
tests/testthat/salmon_data/salmon_09_09.RCC
tests/testthat/salmon_data/salmon_07_07.RCC
tests/testthat/salmon_data/salmon_06_06.RCC
tests/testthat/salmon_data/salmon_11_11.RCC
tests/testthat/salmon_data/salmon_08_08.RCC
vignettes/nacho_hex.png
vignettes/README-app.png
vignettes/NACHO.Rmd vignettes/NACHO-analysis.Rmd
vignettes/README-visualise.png
vignettes/nacho.bib
data/GSE74821.rda
man/normalise.Rd man/NACHO-package.Rd man/autoplot.Rd man/load_rcc.Rd man/autoplot.nacho.Rd man/GSE74821.Rd man/visualise.Rd man/render.Rd man/check_outliers.Rd man/print.nacho.Rd man/deploy.Rd
man/figures/nacho_hex.png
man/figures/app_screenshot.R
man/figures/README-app.png
man/figures/README-visualise.png
NACHO documentation built on Nov. 25, 2022, 1:05 a.m.