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#' normalise_counts
#'
#' @param data [[data.frame]] A `data.frame` with the count data.
#' @inheritParams load_rcc
#'
#' @keywords internal
#' @usage NULL
#' @noRd
#'
#' @return [[numeric]]
normalise_counts <- function(data, housekeeping_norm) {
out <- (data[["Count"]] - data[["Negative_factor"]]) * data[["Positive_factor"]]
if (housekeeping_norm & "House_factor" %in% colnames(data)) {
out <- out * data[["House_factor"]]
}
out[out <= 0] <- 0.1
round(out)
}
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