Description Usage Arguments Value See Also
View source: R/calc_sim_score.R
This function was used to calculate the similarity scores between a network and the reference network.
1 | calc_sim_score(net, NFPnet, nperm = 100, ...)
|
net, |
a graphNel object to represent the query biological networks,
for more details see |
NFPnet, |
a NFPRefnet object, one or more kegg pathway map, or
customized networks. For more details see |
nperm, |
number of random networks for similarity score standardization |
..., |
arguments passed to apcluster |
a similarity scoring vector,length is the same as the number of networks
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