NIPTeR: Fast and Accurate Trisomy Prediction in Non-Invasive Prenatal Testing

Fast and Accurate Trisomy Prediction in Non-Invasive Prenatal Testing.

AuthorDirk de Weerd, Lennart Johansson
Date of publication2016-03-09 18:55:22
MaintainerLennart Johansson <l.johansson@umcg.nl>
LicenseGNU Lesser General Public License
Version1.0.2

View on CRAN

Functions

add_samples_controlgroup Man page
as_control_group Man page
bin_bam_sample Man page
calculate_ncv_score Man page
calculate_z_score Man page
chi_correct Man page
chrfractions Man page
diagnose_control_group Man page
gc_correct Man page
getcontrolchromosomes Man page
getfractionscontrolgroup Man page
getreadscontrolgroup Man page
match_control_group Man page
nipt_sample Man page
perform_regression Man page
prepare_ncv Man page
remove_duplicates_controlgroup Man page
remove_sample_controlgroup Man page
retrieve_fractions_of_interest Man page

Files

NIPTeR
NIPTeR/inst
NIPTeR/inst/doc
NIPTeR/inst/doc/NIPTeR.R
NIPTeR/inst/doc/NIPTeR.html
NIPTeR/inst/doc/NIPTeR.Rmd
NIPTeR/NAMESPACE
NIPTeR/R
NIPTeR/R/bin_sample.R NIPTeR/R/regression_result.R NIPTeR/R/regression.R NIPTeR/R/general_functions.R
NIPTeR/R/sysdata.rda
NIPTeR/R/bin_gc_correct.R NIPTeR/R/Sample.R NIPTeR/R/best_fit_beta.R NIPTeR/R/prepare_ncv_template.R NIPTeR/R/diagnose_control_group.R NIPTeR/R/chi_correction.R NIPTeR/R/z_score.R NIPTeR/R/gc_correct_distribute.R NIPTeR/R/ncv_calculation.R NIPTeR/R/control_group.R NIPTeR/R/constants.R NIPTeR/R/ncv_template.R NIPTeR/R/gc_correct.R
NIPTeR/vignettes
NIPTeR/vignettes/figures
NIPTeR/vignettes/figures/simple_workflow.png
NIPTeR/vignettes/figures/complex_workflow.png
NIPTeR/vignettes/figures/control_group_workflow.png
NIPTeR/vignettes/NIPTeR.Rmd
NIPTeR/MD5
NIPTeR/build
NIPTeR/build/vignette.rds
NIPTeR/DESCRIPTION
NIPTeR/man
NIPTeR/man/remove_sample_controlgroup.Rd NIPTeR/man/retrieve_fractions_of_interest.Rd NIPTeR/man/calculate_z_score.Rd NIPTeR/man/add_samples_controlgroup.Rd NIPTeR/man/as_control_group.Rd NIPTeR/man/gc_correct.Rd NIPTeR/man/getcontrolchromosomes.Rd NIPTeR/man/getreadscontrolgroup.Rd NIPTeR/man/remove_duplicates_controlgroup.Rd NIPTeR/man/getfractionscontrolgroup.Rd NIPTeR/man/chrfractions.Rd NIPTeR/man/match_control_group.Rd NIPTeR/man/prepare_ncv.Rd NIPTeR/man/diagnose_control_group.Rd NIPTeR/man/bin_bam_sample.Rd NIPTeR/man/calculate_ncv_score.Rd NIPTeR/man/perform_regression.Rd NIPTeR/man/chi_correct.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.