plot_iter: Plot iterations vs parameters/OBJ

In NMproject: Script Based 'NONMEM' Model Development

Plot iterations vs parameters/OBJ

Description

Non interactive ggplot2 based version of the OFV/parameter vs iteration plot in shiny run monitor shiny_nm(). Used mainly for inclusion in diagnostic reports.

Usage

plot_iter(r, trans = TRUE, skip = 0, yvar = "OBJ")

Arguments

r	An nm object.
trans	Logical (default = TRUE). Should parameter transformations be performed in accordance with $THETA/$OMEGA/$SIGMA comments
skip	Numeric (default = 0). The number of iterations to skip when plotting. For observing stationarity it is often useful to remove the beginning iterations where the OFV and parameters may move a lot.
yvar	Character (default = "OBJ"). Name of variable/parameter to display.

Value

A ggplot2 object.

See Also

shiny_nm(), nm_render()

NMproject documentation built on Sept. 30, 2022, 1:06 a.m.