Files in NanoStringNorm
Normalize NanoString miRNA and mRNA Data

NAMESPACE
NEWS
MD5
DESCRIPTION
R/nsn.R R/get.trait.summary.stats.R R/code.count.normalization.R R/other.normalization.R R/norm.comp.R R/NanoStringNorm.R R/unit.testing.NanoStringNorm.R R/read.markup.RCC.R R/probe.correction.factor.normalization.R R/get.gene.summary.stats.R R/Plot.NanoStringNorm.R R/get.beta.se.and.p.R R/get.geo.mean.R R/get.mean.sd.and.cv.R R/other.normalization.rank.normal.R R/get.batch.effects.R R/other.normalization.zscore.R R/Plot.NanoStringNorm.gvis.R R/get.ttest.and.foldchange.R R/other.normalization.quantile.R R/sample.content.normalization.R R/check.trait.values.R R/other.normalization.vsn.R R/predict.concentration.R R/get.sample.summary.stats.R R/background.normalization.R R/read.xls.RCC.R R/output.formatting.R
build/vignette.rds
tests/NanoStringNorm.unitTests.R
data/NanoString.rda
inst/unitTests/debug_test_probe.correction.factor.R inst/unitTests/test_other.normalization.R inst/unitTests/test_sample.summary.R inst/unitTests/test_NanoStringNorm.R inst/unitTests/test_output.formatting.R inst/unitTests/test_batch.effects.R inst/unitTests/test_code.count.normalization.R inst/unitTests/test_background.normalization.R inst/unitTests/test_sample.content.normalization.R inst/unitTests/test_predict.concentration.R inst/unitTests/test_check.trait.values.R inst/doc/NanoStringNorm_Introduction.R inst/doc/NanoStringNorm_Introduction.pdf
inst/doc/NanoStringNorm_Introduction.Rnw
inst/extdata/RCC_files/RCCCollector1_rat_tcdd.xls
inst/extdata/input/mRNA_TCDD.txt
inst/extdata/input/2011-11-01_NanoString_mRNA_TCDD_anno.txt
inst/extdata/input/date_data.txt
inst/extdata/input/mRNA_TCDD_strain_info.txt
inst/extdata/input/mRNA_TCDD_anno.txt
inst/extdata/input/mRNA_TCDD_matrix.txt
inst/extdata/output/mRNA_TCDD_mean.2sd_Background_Normalization.txt.gz
inst/extdata/output/mRNA_TCDD_max_Background_Normalization.txt.gz
inst/extdata/output/mRNA_TCDD_Check_Traits.txt.gz
inst/extdata/output/mRNA_TCDD_top.mean_SampleContent_Normalization.txt.gz
inst/extdata/output/mRNA_TCDD_housekeeping.sum_SampleContent_Normalization.txt.gz
inst/extdata/output/mRNA_TCDD_NSN_none.txt.gz
inst/extdata/output/mRNA_TCDD_top.geo.mean_SampleContent_Normalization.txt.gz
inst/extdata/output/mRNA_TCDD_sum_Code_Count_Normalization.txt.gz
inst/extdata/output/mRNA_TCDD_Gene_Summary.txt.gz
inst/extdata/output/mRNA_TCDD_Batch_effects.txt.gz
inst/extdata/output/mRNA_TCDD_geo.mean_Code_Count_Normalization.txt.gz
inst/extdata/output/mRNA_TCDD_Predict_Conc.txt.gz
inst/extdata/output/mRNA_TCDD_total.sum_SampleContent_Normalization.txt.gz
inst/extdata/output/mRNA_TCDD_quantile_Other_Normalization.txt.gz
inst/extdata/output/mRNA_TCDD_zscore_Other_Normalization.txt.gz
inst/extdata/output/mRNA_TCDD_NSN_none_matrix.txt.gz
inst/extdata/output/mRNA_TCDD_NSN_random.txt.gz
inst/extdata/output/mRNA_TCDD_housekeeping.geomean_SampleContent_Normalization.txt.gz
inst/extdata/output/date_data.txt
inst/extdata/output/mRNA_TCDD_Output_Formatting_roundT_logT.txt.gz
inst/extdata/output/mRNA_TCDD_mean_Background_Normalization.txt.gz
inst/extdata/output/mRNA_TCDD_Sample_Summary.txt.gz
inst/scripts/create_test_input_output_files.R man/nsn.Rd man/NanoStringNorm-package.Rd man/Plot.NanoStringNorm.gvis.Rd man/read.xls.RCC.Rd man/Plot.NanoStringNorm.Rd man/NanoString.Rd man/NanoString.mRNA.Rd man/read.markup.RCC.Rd man/norm.comp.Rd man/NanoStringNorm.Rd man/other.normalization.Rd
vignettes/NanoStringNorm_Introduction.Rnw
vignettes/plot_NSN_gvis_sampleStats_screenshot.png
vignettes/plot_NSN_gvis_geneStats_screenshot.png
vignettes/Rat_Strain_Normalization_Method_Comparison.png
NanoStringNorm documentation built on Dec. 13, 2017, 1:06 a.m.