Processing of Oxy-Bisulfite Microarray Data

diffBeta1 | First derivative of beta minus-log-pdf with respect to first... |

diffBeta2 | First derivative of beta minus-log-pdf with respect to second... |

exampleMethBS | Sample Data: Methylation (red) signals from conventional... |

exampleMethOxBS | Sample Data: Methylation (red) signals from oxy-bisulfite... |

exampleUnmethBS | Sample Data: Unmethylated (green) signals from conventional... |

exampleUnmethOxBS | Sample Data: Unmethylated (green) signals from oxy-bisulfite... |

fitOneOxBS | Fit one OxyBS result |

fitOxBS | Fit OxyBS for one specimen |

likeOxBS | Likelihood function for C/5mC/5hmC likelihood estimator |

scoreOxBS | Score function for C/5mC/5hmC likelihood estimator |

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