fitOneOxBS: Fit one OxyBS result
In OxyBS: Processing of Oxy-Bisulfite Microarray Data
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Description
Uses maximum likelihood to estimate (C,5mC,5hmC) for one CpG and one specimen
Usage
1
fitOneOxBS(betaBS, betaOxBS, signalBS, signalOxBS, eps=1E-5)
Arguments
betaBS
beta value from conventional bisulfite conversion
betaOxBS
beta value from oxy-bisulfite conversion
signalBS
total signal from conventional bisulfite conversion
signalOxBS
total signal from oxy-bisulfite conversion
eps
small positive value representing numerical zero
Details
Uses maximum likelihood to estimate (C,5mC,5hmC) for one CpG and one specimen;
not typically called by user.
Value
(C,5mC,5hmC) for one CpG and one specimen.
Author(s)
E. Andres Houseman
See Also
OxyBS documentation built on May 2, 2019, 8:51 a.m.
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Description Usage Arguments Details Value Author(s) See Also
Description
Uses maximum likelihood to estimate (C,5mC,5hmC) for one CpG and one specimen
Usage
1 | fitOneOxBS(betaBS, betaOxBS, signalBS, signalOxBS, eps=1E-5)
|
Arguments
betaBS |
beta value from conventional bisulfite conversion |
betaOxBS |
beta value from oxy-bisulfite conversion |
signalBS |
total signal from conventional bisulfite conversion |
signalOxBS |
total signal from oxy-bisulfite conversion |
eps |
small positive value representing numerical zero |
Details
Uses maximum likelihood to estimate (C,5mC,5hmC) for one CpG and one specimen; not typically called by user.
Value
(C,5mC,5hmC) for one CpG and one specimen.
Author(s)
E. Andres Houseman
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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