Score function for C/5mC/5hmC likelihood estimator

Description

Score function for C/5mC/5hmC likelihood estimator

Usage

1
scoreOxBS(theta, betaBS, betaOxBS, signalBS, signalOxBS)

Arguments

theta

2-element parameter vector

betaBS

beta value from conventional bisulfite conversion

betaOxBS

beta value from oxy-bisulfite conversion

signalBS

total signal from conventional bisulfite conversion

signalOxBS

total signal from oxy-bisulfite conversion

Details

Score function for C/5mC/5hmC likelihood estimator; used for maximum likelihood estimation, not typically called by user.

Value

score vector for C/5mC/5hmC likelihood

Author(s)

E. Andres Houseman

See Also

fitOneOxBS