Man pages for PAGWAS
Pathway Analysis Methods for Genomewide Association Data
| create.pathway.df | Creates a pathway data frame |
| FM.chi.pvalue | Calculates the Fisher's method p-value for each tested... |
| genes | A data frame of 20 artificial genes with their chromosomes... |
| genotypes | Genotypes for 100 SNPs and 75 individuals |
| NBF | Normal/Bayes factors method for finding associated pathways |
| PAGWAS-package | Pathway Analysis Methods for Genomewide Association Data |
| pathways | A list of 2 pathways with their gene members |
| SNAL | Sparse Normal/Adaptive lasso method for finding associated... |
| SNAL.calculation | Sparse Normal/Adaptive lasso method for finding associated... |
| SNPs | A data frame of 100 artificial SNPs with their chromosomes... |
| snps.to.genes | Assigns SNPs to genes |
| snps.to.pathways | Assigns SNPs to pathways |
