MergeProbDup: Merge two objects of class 'ProbDup'

In PGRdup: Discover Probable Duplicates in Plant Genetic Resources Collections

Merge two objects of class ProbDup

Description

MergeProbDup merges two objects of class ProbDup into a single one.

Usage

MergeProbDup(pdup1, pdup2)

Arguments

pdup1	An object of class ProbDup.
pdup2	An object of class ProbDup.

Value

An object of class ProbDup with the merged list of fuzzy, phonetic and semantic probable duplicate sets.

See Also

ProbDup, SplitProbDup

Examples

## Not run: 
#' # Load PGR passport database
GN <- GN1000

# Specify as a vector the database fields to be used
GNfields <- c("NationalID", "CollNo", "DonorID", "OtherID1", "OtherID2")

# Clean the data
GN[GNfields] <- lapply(GN[GNfields], function(x) DataClean(x))
y1 <- list(c("Gujarat", "Dwarf"), c("Castle", "Cary"), c("Small", "Japan"),
c("Big", "Japan"), c("Mani", "Blanco"), c("Uganda", "Erect"),
c("Mota", "Company"))
y2 <- c("Dark", "Light", "Small", "Improved", "Punjab", "SAM")
y3 <- c("Local", "Bold", "Cary", "Mutant", "Runner", "Giant", "No.",
        "Bunch", "Peanut")
GN[GNfields] <- lapply(GN[GNfields], function(x) MergeKW(x, y1, delim = c("space", "dash")))
GN[GNfields] <- lapply(GN[GNfields], function(x) MergePrefix(x, y2, delim = c("space", "dash")))
GN[GNfields] <- lapply(GN[GNfields], function(x) MergeSuffix(x, y3, delim = c("space", "dash")))

# Generate KWIC index
GNKWIC <- KWIC(GN, GNfields)

# Specify the exceptions as a vector
exep <- c("A", "B", "BIG", "BOLD", "BUNCH", "C", "COMPANY", "CULTURE", 
         "DARK", "E", "EARLY", "EC", "ERECT", "EXOTIC", "FLESH", "GROUNDNUT", 
         "GUTHUKAI", "IMPROVED", "K", "KUTHUKADAL", "KUTHUKAI", "LARGE", 
         "LIGHT", "LOCAL", "OF", "OVERO", "P", "PEANUT", "PURPLE", "R", 
         "RED", "RUNNER", "S1", "SAM", "SMALL", "SPANISH", "TAN", "TYPE", 
         "U", "VALENCIA", "VIRGINIA", "WHITE")
          
# Specify the synsets as a list
syn <- list(c("CHANDRA", "AH114"), c("TG1", "VIKRAM"))

# Fetch probable duplicate sets
GNdup <- ProbDup(kwic1 = GNKWIC, method = "a", excep = exep, fuzzy = TRUE,
                 phonetic = TRUE, encoding = "primary", 
                 semantic = TRUE, syn = syn)
                 
# Split the probable duplicate sets
GNdupSplit <- SplitProbDup(GNdup, splitat = c(10, 10, 10))

# Merge the split sets
GNdupMerged <- MergeProbDup(GNdupSplit[[1]], GNdupSplit[[3]])


## End(Not run)

PGRdup documentation built on Sept. 1, 2023, 1:05 a.m.