analyze_network-omics_network-method: Analysing the network
In Patterns: Deciphering Biological Networks with Patterned Heterogeneous Measurements
analyze_network,omics_network-method R Documentation
Analysing the network
Description
Calculates some indicators for each node in the network.
Usage
## S4 method for signature 'omics_network'
analyze_network(Omega, nv, label_v = NULL)
Arguments
Omega
a omics_network object
nv
the level of cutoff at which the analysis should be done
label_v
(optionnal) the name of the genes
Value
A matrix containing, for each node, its betweenness,its degree, its
output, its closeness.
Author(s)
Bertrand Frederic, Myriam Maumy-Bertrand.
Examples
data(network)
analyze_network(network,nv=0)
Patterns documentation built on Dec. 1, 2022, 5:09 p.m.
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| analyze_network,omics_network-method | R Documentation |
Analysing the network
Description
Calculates some indicators for each node in the network.
Usage
## S4 method for signature 'omics_network' analyze_network(Omega, nv, label_v = NULL)
Arguments
Omega |
a omics_network object |
nv |
the level of cutoff at which the analysis should be done |
label_v |
(optionnal) the name of the genes |
Value
A matrix containing, for each node, its betweenness,its degree, its output, its closeness.
Author(s)
Bertrand Frederic, Myriam Maumy-Bertrand.
Examples
data(network) analyze_network(network,nv=0)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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