Files in PhenotypeR
Assess Study Cohorts Using a Common Data Model

MD5
README.md
NAMESPACE
DESCRIPTION
R/utils-pipe.R R/phenotypeR-package.R R/addCodelistAttribute.R R/documentationHelper.R R/cohortDiagnostics.R R/reexports.R R/databaseDiagnostics.R R/mockPhenotypeR.R R/populationDiagnostics.R R/phenotypeDiagnostics.R R/codelistDiagnostics.R R/getCohortExpectations.R R/shinyDiagnostics.R
inst/WORDLIST
inst/doc/DatabaseDiagnostics.R
inst/doc/CodelistDiagnostics.html
inst/doc/CohortDiagnostics.R inst/doc/PhenotypeExpectations.Rmd inst/doc/CohortDiagnostics.Rmd
inst/doc/PopulationDiagnostics.html
inst/doc/CodelistDiagnostics.Rmd inst/doc/DatabaseDiagnostics.Rmd
inst/doc/DatabaseDiagnostics.html
inst/doc/ShinyDiagnostics.html
inst/doc/CodelistDiagnostics.R
inst/doc/PhenotypeExpectations.html
inst/doc/PhenotypeDiagnostics.html
inst/doc/ShinyDiagnostics.R
inst/doc/CohortDiagnostics.html
inst/doc/PopulationDiagnostics.Rmd inst/doc/PopulationDiagnostics.R inst/doc/PhenotypeExpectations.R inst/doc/PhenotypeDiagnostics.Rmd inst/doc/PhenotypeDiagnostics.R inst/doc/ShinyDiagnostics.Rmd inst/shiny/ui.R inst/shiny/background.md inst/shiny/global.R inst/shiny/server.R
inst/shiny/www/ohdsi_logo.png
inst/shiny/www/logo.png
inst/shiny/www/phenotyper_logo.png
inst/shiny/www/ohdsi_logo.svg
inst/shiny/www/hds_logo.svg
inst/shiny/data/readme.md
inst/shiny/data/appData.RData
inst/shiny/data/raw/readme.md inst/shiny/data/raw/expectations/readme.md inst/shiny/scripts/functions.R inst/shiny/scripts/preprocess.R
inst/example_cohorts/GiBleed_default.json
inst/example_cohorts/GIBleed_male.json
inst/rmd/phenotype_report.Rmd
build/vignette.rds
tests/testthat.R tests/testthat/test-dbms.R tests/testthat/test-databaseDiagnostics.R tests/testthat/test-cohortDiagnostics.R tests/testthat/test-populationDiagnostics.R tests/testthat/test-shinyDiagnostics.R tests/testthat/test-addCodelistAttribute.R tests/testthat/test-codelistDiagnostics.R tests/testthat/test-phenotypeDiagnostics.R tests/testthat/test-getCohortExpectations.R vignettes/PhenotypeExpectations.Rmd vignettes/CohortDiagnostics.Rmd vignettes/CodelistDiagnostics.Rmd vignettes/DatabaseDiagnostics.Rmd vignettes/PopulationDiagnostics.Rmd vignettes/PhenotypeDiagnostics.Rmd vignettes/ShinyDiagnostics.Rmd
vignettes/vignette_phenotype_expectations/expectations_3.csv
vignettes/vignette_phenotype_expectations/diag_results.csv
vignettes/vignette_phenotype_expectations/expectations_1.csv
vignettes/vignette_phenotype_expectations/expectations_2.csv
man/databaseDiagnostics.Rd man/reexports.Rd man/tableCohortExpectations.Rd man/populationSampleDoc.Rd man/phenotypeDiagnostics.Rd man/addCodelistAttribute.Rd man/matchedDoc.Rd man/cohortDiagnostics.Rd man/cohortDoc.Rd man/directoryDoc.Rd man/codelistDiagnostics.Rd man/getCohortExpectations.Rd man/mockPhenotypeR.Rd man/pipe.Rd man/expectationsDoc.Rd man/populationDiagnostics.Rd man/shinyDiagnostics.Rd man/PhenotypeR-package.Rd man/survivalDoc.Rd man/resultDoc.Rd
man/figures/logo.png
PhenotypeR documentation built on Aug. 8, 2025, 6:30 p.m.