RCircos.Get.Chromosome.Order: Find the order of Chromosome Names
In RCircos: Circos 2D Track Plot
View source: R/RCircosChromosomeIdeogram.R
RCircos.Get.Chromosome.Order R Documentation
Find the order of Chromosome Names
Description
Generate an ordered chromosome names from input. For human and other mammalian animals, numeric names (integers or Roman numbers) will go first followed by chromosome X, Y, and M. If all chromosome names are character only, they will be in alphabetical order.
Usage
RCircos.Get.Chromosome.Order(chromosomes=NULL)
Arguments
chromosomes
Character vector, names of chromosomes.
Value
Character vector, ordered chromosome name list.
Author(s)
Henry Zhang
Examples
library(RCircos)
chromosomes <- paste0("chr", c(1:10, 21,22, 11:20, "X", "Y"))
chromosomes <- RCircos.Get.Chromosome.Order(chromosomes)
RCircos documentation built on March 18, 2022, 7:59 p.m.
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View source: R/RCircosChromosomeIdeogram.R
| RCircos.Get.Chromosome.Order | R Documentation |
Find the order of Chromosome Names
Description
Generate an ordered chromosome names from input. For human and other mammalian animals, numeric names (integers or Roman numbers) will go first followed by chromosome X, Y, and M. If all chromosome names are character only, they will be in alphabetical order.
Usage
RCircos.Get.Chromosome.Order(chromosomes=NULL)
Arguments
chromosomes |
Character vector, names of chromosomes. |
Value
Character vector, ordered chromosome name list.
Author(s)
Henry Zhang
Examples
library(RCircos)
chromosomes <- paste0("chr", c(1:10, 21,22, 11:20, "X", "Y"))
chromosomes <- RCircos.Get.Chromosome.Order(chromosomes)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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