RCircos.Link.Data: Sample Data for RCircos Link Plot

In RCircos: Circos 2D Track Plot

Sample Data for RCircos Link Plot

Description

A data frame containing paired genomic position data for each row. The content of each row must be in the order of name, start and end position of chromosome A then name, start and end position of chromosome B. This data frame is directly used to draw link lines without extra processing.

Usage

data(RCircos.Link.Data)

Format

A data frame with 71 observations on the following 6 variables.

Chromosome

a factor with levels chr1 chr10 chr11 chr12 chr14 chr15 chr17 chr19 chr2 chr21 chr22 chr3 chr4 chr5 chr6 chr7 chr8 chr9 chrX

chromStart

a numeric vector

chromEnd

a numeric vector

Chromosome.1

a factor with levels chr1 chr10 chr11 chr12 chr14 chr15 chr16 chr17 chr18 chr19 chr2 chr20 chr21 chr22 chr3 chr4 chr5 chr6 chr7 chr8 chr9 chrX

chromStart.1

a numeric vector

chromEnd.1

a numeric vector

Source

Unpublished data.

RCircos documentation built on March 18, 2022, 7:59 p.m.