RFLPdata: Example data set for RFLP data

Description Usage Format Details Source References Examples

Description

This is an example data set for RFLP data.

Usage

1

Format

A data frame with 737 observations on the following four variables

Sample

character: sample identifier.

Band

integer: band number.

MW

integer: molecular weight.

Gel

character: gel identifier.

Details

The molecular weight was determined using the software package Gene Profiler 4.05 (Scanalytics Inc.) for DNA fragment analysis and genotyping, and exported to a text file.

Source

The data set was generated by F. Flessa.

References

Flessa, F., Kehl, A., Kohl, M. Analysing diversity and community structures using PCR-RFLP: a new software application. Molecular Ecology Resources 2013 Jul; 13(4):726-33.

Examples

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2

Example output

Loading required package: RColorBrewer
'data.frame':	737 obs. of  4 variables:
 $ Sample: chr  "Ni_25_B1" "Ni_25_B1" "Ni_25_B1" "Ni_25_B1" ...
 $ Band  : int  1 2 3 4 5 6 1 2 3 4 ...
 $ MW    : int  822 691 133 118 99 91 807 669 136 100 ...
 $ Gel   : chr  "090515" "090515" "090515" "090515" ...

RFLPtools documentation built on May 4, 2021, 1:06 a.m.