add_names: Add row and column names to the adjacency matrix A

View source: R/proposed_steps.R

add_namesR Documentation

Add row and column names to the adjacency matrix A

Description

Here we add the names of the transcription factors (Tfs) as rownames and names of the target genes as column names to the adjacency matrix A.

Usage

add_names(A, tfs, targets)

Arguments

A

Adjacency matrix A obtained as a result of GBM procedure.

tfs

List of names of transcription factors.

targets

List of names of target genes.

Details

In case of DREAM Challenge datasets list of transcription factors is same as list of target genes and are referred as G1, ..., G100.

Author(s)

Raghvendra Mall <rmall@hbku.edu.qa>


RGBM documentation built on Aug. 11, 2022, 5:10 p.m.

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