Man pages for RNAsmc
RNA Secondary Structure Module Mining, Comparison and Plotting
| bulge_loop | Internal function for getting bulge loops in a RNA secondary... |
| bulgeLoopsPlot | A function for bulge loops plotting |
| ct2dot | ct2dot |
| DataCluster1 | A RNA secondary structure file containing structure... |
| DataCluster2 | A RNA secondary structure file containing structure... |
| DataCluster3 | A RNA secondary structure file containing structure... |
| DataCluster4 | A RNA secondary structure file containing structure... |
| DataCompareStr1 | A RNA secondary structure file containing structure... |
| DataCompareStr2 | A RNA secondary structure file containing structure... |
| DataRNAstr | A RNA secondary structure file containing structure... |
| external_loop | Internal function for getting external loops in a RNA... |
| externalLoopsPlot | A function for bulge loops plotting |
| getCompare | Internal function for getting similarity score in a RNA... |
| getScore | Internal function for getting similarity score in a RNA... |
| getSubStr | Internal function for getting substructure information in a... |
| hairpin_loop | Internal function for getting hairpin loops |
| hairpinLoopsPlot | A function for hairpin loops plotting |
| internal_loop | Internal function for getting internal loops |
| internalLoopsPlot | A function for internal loops plotting |
| multi_branch_loop | Internal function for getting multi-branch loops |
| multiBranchLoopsPlot | A function for multi-branch loops plotting |
| RNAcirPlot | function for plotting RNA secondary structure in a circos... |
| RNAstrCluster | A function for RNAs clustering by their structure similarites |
| RNAstrPlot | A function for whole RNA secondary structure plotting |
| stem | Internal function for getting stems |
| stemPlot | A function for stems plotting |
| strCompare | strCompare |
| strComparePlot | strComparePlot |
