bulge_loop | Internal function for getting bulge loops in a RNA secondary... |
bulgeLoopsPlot | A function for bulge loops plotting |
ct2dot | ct2dot |
DataCluster1 | A RNA secondary structure file containing structure... |
DataCluster2 | A RNA secondary structure file containing structure... |
DataCluster3 | A RNA secondary structure file containing structure... |
DataCluster4 | A RNA secondary structure file containing structure... |
DataCompareStr1 | A RNA secondary structure file containing structure... |
DataCompareStr2 | A RNA secondary structure file containing structure... |
DataRNAstr | A RNA secondary structure file containing structure... |
external_loop | Internal function for getting external loops in a RNA... |
externalLoopsPlot | A function for bulge loops plotting |
getCompare | Internal function for getting similarity score in a RNA... |
getScore | Internal function for getting similarity score in a RNA... |
getSubStr | Internal function for getting substructure information in a... |
hairpin_loop | Internal function for getting hairpin loops |
hairpinLoopsPlot | A function for hairpin loops plotting |
internal_loop | Internal function for getting internal loops |
internalLoopsPlot | A function for internal loops plotting |
multi_branch_loop | Internal function for getting multi-branch loops |
multiBranchLoopsPlot | A function for multi-branch loops plotting |
RNAcirPlot | function for plotting RNA secondary structure in a circos... |
RNAstrCluster | A function for RNAs clustering by their structure similarites |
RNAstrPlot | A function for whole RNA secondary structure plotting |
stem | Internal function for getting stems |
stemPlot | A function for stems plotting |
strCompare | strCompare |
strComparePlot | strComparePlot |
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