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RRphylo: Phylogenetic Ridge Regression Methods for Comparative Studies
Functions for phylogenetic analysis (Castiglione et al., 2018 <doi:10.1111/2041-210X.12954>). The functions perform the estimation of phenotypic evolutionary rates, identification of phenotypic evolutionary rate shifts, quantification of direction and size of evolutionary change in multivariate traits, the computation of ontogenetic shape vectors and test for morphological convergence.
Getting started
Package overview
README.md
Creating alternative phylogenetic hypotheses from a starting tree"
Phylogenetic tree manipulation"
Plotting tools"
RRphylo"
Searching for morphological convergence"
Searching for rate shifts"
Searching for temporal trends in phenotypes or rates"
Testing RRphylo methods overfit"
Browse package contents
Package details |
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| Author | Pasquale Raia, Silvia Castiglione, Carmela Serio, Alessandro Mondanaro, Marina Melchionna, Mirko Di Febbraro, Antonio Profico, Francesco Carotenuto |
| Maintainer | Pasquale Raia <pasquale.raia@unina.it> |
| License | GPL-2 |
| Version | 2.8.0 |
| Package repository | View on CRAN |
| Installation |
Install the latest version of this package by entering the following in R:
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