pointStress | R Documentation |
Functions to get stress associated with individual points in a map.
agStress(map, antigens = TRUE, optimization_number = 1)
srStress(map, sera = TRUE, optimization_number = 1)
srStressPerTiter(map, sera = TRUE, optimization_number = 1)
agStressPerTiter(map, antigens = TRUE, optimization_number = 1)
map |
The acmap data object |
antigens |
Which antigens to check stress for, specified by index or name (defaults to all antigens). |
optimization_number |
The optimization number |
sera |
Which sera to check stress for, specified by index or name (defaults to all sera). |
A numeric vector of point stresses
See mapStress()
for getting the total map stress directly.
Other map diagnostic functions:
agCohesion()
,
bootstrapBlobs()
,
bootstrapMap()
,
checkHemisphering()
,
dimensionTestMap()
,
logtiterTable()
,
map-table-distances
,
mapBootstrapCoords
,
mapDistances()
,
mapRelaxed()
,
mapResiduals()
,
ptBootstrapBlob
,
ptBootstrapCoords()
,
ptLeverage
,
ptTriangulationBlob
,
recalculateStress()
,
stressTable()
,
tableColbases()
,
tableDistances()
,
triangulationBlobs()
,
unstableMaps
Other functions relating to map stress calculation:
logtiterTable()
,
mapDistances()
,
mapResiduals()
,
recalculateStress()
,
stressTable()
,
tableColbases()
,
tableDistances()
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