ptTriangulationBlob: Get antigen or serum triangulation blob information

In Racmacs: Antigenic Cartography Macros

Get antigen or serum triangulation blob information

Description

Get antigen or serum triangulation blob information for plotting with the blob() function.

Usage

agTriangulationBlob(map, antigen, optimization_number = 1)

srTriangulationBlob(map, serum, optimization_number = 1)

agTriangulationBlobs(map, optimization_number = 1)

srTriangulationBlobs(map, optimization_number = 1)

ptTriangulationBlobs(map, optimization_number = 1)

Arguments

map	An acmap object
antigen	The antigen to get the blob for
optimization_number	Optimization number from which to get blob information
serum	The serum to get the blob for

Value

Returns an object of class "blob" that can be plotted using the blob() function.

See Also

Other map diagnostic functions: agCohesion(), bootstrapBlobs(), bootstrapMap(), checkHemisphering(), dimensionTestMap(), logtiterTable(), map-table-distances, mapBootstrapCoords, mapDistances(), mapRelaxed(), mapResiduals(), pointStress, ptBootstrapBlob, ptBootstrapCoords(), ptLeverage, recalculateStress(), stressTable(), tableColbases(), tableDistances(), triangulationBlobs(), unstableMaps

Racmacs documentation built on June 22, 2024, 11:33 a.m.